BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026F11LP1|AL428592
(844 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1035 1474 0.0
3x_Contig1783 194 2e-49
>3x_Contig1035
Length = 4175
Score = 1474 bits (743), Expect = 0.0
Identities = 765/769 (99%), Gaps = 3/769 (0%)
Strand = Plus / Plus
Query: 1 gatcccagagaacgtgtctccaaaggaaatcgggttgattattggtattgaacacgactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3397 gatcccagagaacgtgtctccaaaggaaatcgggttgattattggtattgaacacgactc 3456
Query: 61 gaagactcctgattggagatcttcttatttgagaagattgcaatttggcaattgggtcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3457 gaagactcctgattggagatcttcttatttgagaagattgcaatttggcaattgggtcgt 3516
Query: 121 acaagccaagccaggccatccagtgatccgtgaaatggtcgcaagggtcactgagactac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3517 acaagccaagccaggccatccagtgatccgtgaaatggtcgcaagggtcactgagactac 3576
Query: 181 attggaaaaaaaatacgctgatgaacttaacatgaacctaagaaacgatctgaccattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3577 attggaaaaaaaatacgctgatgaacttaacatgaacctaagaaacgatctgaccattat 3636
Query: 241 gggctggaccggaactggtgcttggaccgacgtaatattcacctatttcaacgattacgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3637 gggctggaccggaactggtgcttggaccgacgtaatattcacctatttcaacgattacgt 3696
Query: 301 tcaaagtggtgttttagacaagatcacttggaaacatttccataacttaaaggtacccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3697 tcaaagtggtgttttagacaagatcacttggaaacatttccataacttaaaggtacccaa 3756
Query: 361 actggtcggagacattctagtgttcccagaagttagtttcaatgcgccacaagctgattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3757 actggtcggagacattctagtgttcccagaagttagtttcaatgcgccacaagctgattc 3816
Query: 421 agacacggattctaaacagttgactaacagtgcgctacatttcgcaacacataccaaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3817 agacacggattctaaacagttgactaacagtgcgctacatttcgcaacacataccaaaat 3876
Query: 481 gaagtcatggaagaaccagcaaaaactccgcggctacaaataacgatttatatagtacta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3877 gaagtcatggaagaaccagcaaaaactccgcggctacaaataacgatttatatagtacta 3936
Query: 541 tattcatatcacaactttaaataattttgttaatccgtttctgacactaaatcatgtata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3937 tattcatatcacaactttaaataattttgttaatccgtttctgacactaaatcatgtata 3996
Query: 601 agttgtggaactaaaatcagagtgcgcccaagctctactaamaactgggcaattaaaaga 660
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3997 agttgtggaactaaaatcagagtgcgcccaagctctactaaaaactgggcaattaaaaga 4056
Query: 661 ctttcctcgtcacttaaacgaatatctgttgtccctatctggttactcatcatctaaaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4057 ctttcctcgtcacttaaacgaatatctgttgtccctatctggttactcatcatctaaaag 4116
Query: 721 cttttccatcccacatcttcatacatgatgttttcttgtc-agaacacg 768
| ||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 4117 c-tttccatcccacatc-tcatacatgatgttttcttgtctagaacacg 4163
>3x_Contig1783
Length = 22123
Score = 194 bits (98), Expect = 2e-49
Identities = 98/98 (100%)
Strand = Plus / Minus
Query: 747 gatgttttcttgtcagaacacggcacacgcctcctggcatgctgtgtgagataatgtaaa 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22116 gatgttttcttgtcagaacacggcacacgcctcctggcatgctgtgtgagataatgtaaa 22057
Query: 807 ggagatttactaggtcatggtacacctggtatccctgg 844
||||||||||||||||||||||||||||||||||||||
Sbjct: 22056 ggagatttactaggtcatggtacacctggtatccctgg 22019
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5284
Number of Sequences: 1807
Number of extensions: 5284
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 2
length of query: 844
length of database: 10,358,551
effective HSP length: 16
effective length of query: 828
effective length of database: 10,329,639
effective search space: 8552941092
effective search space used: 8552941092
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)